CDS

Accession Number TCMCG015C65690
gbkey CDS
Protein Id XP_027098249.1
Location join(42148955..42149826,42149947..42150079,42150223..42150278,42150381..42150438,42150552..42151946,42152333..42152938,42153019..42153165,42153239..42153507,42153588..42153699,42153786..42154043,42154484..42154530,42154617..42154680)
Gene LOC113717670
GeneID 113717670
Organism Coffea arabica

Protein

Length 1338aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027242448.1
Definition RNA polymerase II C-terminal domain phosphatase-like 3 isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category K
Description catalytic domain of ctd-like phosphatases
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K18999        [VIEW IN KEGG]
EC 3.1.3.16        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004721        [VIEW IN EMBL-EBI]
GO:0004722        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006470        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008022        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008420        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009787        [VIEW IN EMBL-EBI]
GO:0009788        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070940        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901419        [VIEW IN EMBL-EBI]
GO:1901420        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905957        [VIEW IN EMBL-EBI]
GO:1905958        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTAGTTGTTGTATCGGATTTGAGTCAAAGTAAAAAAACCCCCTTAGGCTGCTCCTCCGTAGTTGAGATGGAAGAATGTGAATCCCAACTGTCTCCCACAGTTTACGACCTCGACGTCGAAGAAGGTGAGATCTCCGATTCTGCTTCTTCTGTTGAGGAAATTAGCGCTGAGGCTTTCAGCAAGAAAGACCGCTTCCCTGCCGCCGCCGCTGTCCCCGATTCGGACTCCTCCGCCGCTCCTCCTCCGCCTCCCCCTCCCAAGGATGTAAATGTCAATCCAGCCAATAGTAATAATTCCTCCAATAATTACCATAACAGTATCAATAATCATAACGCTAATCAAAATCAAAAGCCTAGGGTTTGGACGATGAGGGATCTATATAAGTATCAGCTTTCCAGGAATTATTCGGCTGGCCTGTACAATCTGGCTTGGGCTTCCGCCGTCCAGAACAAGCCTTTGGACGAGATTTTAGTCATGGAGTTCCCCAAAGCTTCTTCTGATAACAATGCCAGCAATTCTAATTTGAAGCGGGATGGGTCGGATAATAGCAGCAGCAGCAGCAACAACCGCAACCACCACGACTACCACCACCACGTCGCTAACAAGAATTCTAGCAGTATTGATGACAGCAAGGACGGGGTTTCTGCTGCTTCCCCGAGTGAGAAGCATGTCATTCAAGTGGACGAGAAGGAGGAGGGGGAGTTGGAAGAAGGGGAAATTGATATGGATTCTGAGATGGGTGAAACTGATGGGGATGTGAGCAAGGAGAATCTATCCGGGGCTGTCAAGGATAAAGAGGCTGTCTTGGAGAAGCAGGTTGATTTGCTTAGAAAAGGGTTTGAGAGTGTGACTGCGAACGAGGCTGAAAAATCATTTGGTGAAGTATCATCCAGAGTGCAAAACCTATTGGACAGTATGCAGGAAATAGCTGAGAACAACATCTTGACTACAAAAGATGTTCTTGTGCAACTCGTGATTACTGCTATTAAGACTCTGAATGCTGTCTTCTGCTCCATGGATCTTAATAAGAAGGAATCCAGCAAGGACATTATGTCAAGGTTGTTAGCTCATGTGTCAAGCCAAAAGTATCTGTTCTCAGCTGAGCAGTTGAAAGAGATAGAAGCTATGACTTCTCTTCTGGATTCTTCATCGGAAACTTTGAGTTCTATGGATGCTAATAGGAATAATGAAATGCGAGAATTAAGTGTGGTTTCCAAGAATGATCTGGATAGTTCTGCGGAAAATATGAAAAGAGTGCCGGAAAAAGTGTTTAATGTAGATTCCATTTCTGTTGAGTCATCTGATCAGCCTGTGCCACCAGCATTGCTAGAATATGGAAAATTGGGAGTAGCTAATTCTAAGTATAAAGGTTTGTCTCTTCCTTTGCTGGACCTTCACAAGGACCATGATGCTGATAGTCTTCCTTCACCAACTCAAGGAGCACCGTCTTGTTTGCCCATCGTAAAGGGGTTTTCAGTGGGACATGGGTTGTTGAAACCGGAGTGGCCTGTTCCTAGAGTAGCTCTTGAGAGAGAGAATGTCCCAATGCATCCTTATGAAACTGATGCTGTTAAGGCTGTTTCTTCCTATCAGCAGAAGTTTGGCGGAAGTTCGTTTCTTATGAATGACAGGCTTCCAAGCCCAACCCCTTCTGAAGATGGTGATGGTGGGGATGGTGACATTAGTGGGGAGGTCTCTAGCTCTTCTAGCATGGATGTGAAGCCTGTGGACACATCAATGGTGGGGCAGCTCACTGCTTCTGATGCTCCCAAGATTGGCATTCTTACGGGACAAGGACTTGCAAATTTGTTGAATGCTCCCTCCTTGAGTTCAGGACCAAGTTCTTCAATGAAAACCTCATCTGCAAAAAGTAGAGATCCTAGGCTTCGACTGGCTAATTCTGATGTGGCTTCTTTGGATCGGCTTTTGCCTGTAGTCAATAGTGAACCTAAGGTGGAGCCTGTTGGGGGCATGATAAGTTCAAGAAAGCAGAAGACAATTGAAGAACAGGTTATGGATGGTCCTGCTTTAAAAAGGCAAAGAAATGAGCAAACTGATTCCTCAGTTGTGAAAAGTGTGCAGACGGTGAGTGGAACTGGTGGTTGGTTGGAGGATAGAGGTACAGCTGTTTTAGGGGCAACAAATAGAAGCCATGCACTGAATAGCAGCGGAAATGATCCTATGAGGCCTGAATATGCTGTAACTCCACTCAGTTCTGGAAGCAGTTTGGCCAATGTAACAGTCAATGGAAACAAGAATCTGCCGCTGACTAATCCTGGTGCAACAGCTTCATTGCATTCTCTTTTGAAAGATATTGCTGTAAACCCATCTATATGGATGAACATAATTAAGATGGAACAACAAAAATCTGCTGATCCTACTAGAAGTACAAGTCAGCCTACATGCTCAAATTCCATTAATGGGTCAGTGAATGCAGTTGTTTCTAAACCCCGGGACCTTGGCCAACAAGCAGCAGGGACACTCCAGGTGACTTCACAAACAGCTTCAGTGGCAGAACCAGGTAAAGTTCGCATGAAACCTCGTGATCCCCGTCGTGTTCTTCACAATAACACGCTTCAAAAAGGCGGGAGCATGGAATTTGATCAATCTCAAAGCAAAAGCAGTACATCAAGCAATCTAGAGATGGTTGGTAACATGAATTTCCAGATACAAGATGATCAGCTTGACAGAAGGGTTGTGCCTTCTAATTCCATTGTTCAACCAGATATTGCTCAGCAGTTCACTAAAAATTTGAAAAATATTGCTGATATTGTTTCTGTTTCTCAAGCAACTTCATCTCAACCTGCCCTTCCTCAAATATCTTTGTCACAACCTTCTCAAGCTTATCAAGGTAGGACAGAGACGATTGGAATGCTGGAGTCAGGCAAACCACAAAGTGGGCCTGGCTTGTCATCCAAAGAAGTTTCTATGGGTTCCTCTCGACCACAGAACAACTGGGATGATGTTGAGCATCTCTTTGAGGGATTCGATGACCAGCAAAAAGCTGCCATCCATAGAGAGAGAGCTAGAAGAATGCAAGAGCAGAGGAAAATGTTTGCTGGGCGGAAACTCTGCCTGGTCTTGGATCTGGATCATACTCTCCTAAATTCAGCGAAGTTTGTTGAAGTGGATCCAATGCATGATGAGATATTGAGGAAAAAGGAGGAGCAAGACCGTGAAAAACCACACAGGCATTTATTCCGGTTTCCTCACATGGGAATGTGGACTAAATTGCGGCCTGGGATCTGGAATTTTTTGGAAAAGGCTAGTAAGCTGTACGAGCTACATCTCTACACGATGGGAAACAAGCTGTATGCCACAGAGATGGCAAAATTGCTTGATCCAAAAGGGGAGTTGTTTGCTGGCCGAGTCATTTCCAGAGGGGATGATGGGGATCTTTTGGATGGTGATGAAAGGGTTCCTAAGAGCAAGGATTTGGAAGGGGTTATGGGTATGGAGTCAGCTGTTGTCATTATAGATGATTCTTTGCGAGTCTGGCCGCATAATAAGTTAAACTTGATAGTTGTTGAAAGGTATATTTTCTTTCCATGTAGTCGGCGCCAATTTGGGCTTCCTGGTCCTTCTCTTCTTGAGATCGATCACGATGAGAGATCAGAAGATGGGACGCTGGCATCTTCTTTGGCAGTTATTGAGAGAATACATGAAATATTTTTTGCACATCAGTCCTTGGATGAAGCTGATGTTAGAAACATCTTAGCCTCAGAGCAGAAGAAGATTTTGGCTGGTTGTCGGATTGTATTTAGTAGGGTATTTCCAGTTGGTGAAGCCAATCCACACTTACATCCTCTTTGGCAGACAGCTGAACAGTTTGGGGCTGTGTGCACCAACTCCATAGATGAACAGGTCACCCATGTTGTTGCCAACTCACTTGGAACGGATAAGGTAAATTGGGCGCTTTCGTCTGGGAGATTTGTCGTGCATCCTGGCTGGGTTGAAGCATCAGCTTTACTTTACCGCAGAGCAAATGAGAAGGATTTTGCTATTAAACCATAA
Protein:  
MLVVVSDLSQSKKTPLGCSSVVEMEECESQLSPTVYDLDVEEGEISDSASSVEEISAEAFSKKDRFPAAAAVPDSDSSAAPPPPPPPKDVNVNPANSNNSSNNYHNSINNHNANQNQKPRVWTMRDLYKYQLSRNYSAGLYNLAWASAVQNKPLDEILVMEFPKASSDNNASNSNLKRDGSDNSSSSSNNRNHHDYHHHVANKNSSSIDDSKDGVSAASPSEKHVIQVDEKEEGELEEGEIDMDSEMGETDGDVSKENLSGAVKDKEAVLEKQVDLLRKGFESVTANEAEKSFGEVSSRVQNLLDSMQEIAENNILTTKDVLVQLVITAIKTLNAVFCSMDLNKKESSKDIMSRLLAHVSSQKYLFSAEQLKEIEAMTSLLDSSSETLSSMDANRNNEMRELSVVSKNDLDSSAENMKRVPEKVFNVDSISVESSDQPVPPALLEYGKLGVANSKYKGLSLPLLDLHKDHDADSLPSPTQGAPSCLPIVKGFSVGHGLLKPEWPVPRVALERENVPMHPYETDAVKAVSSYQQKFGGSSFLMNDRLPSPTPSEDGDGGDGDISGEVSSSSSMDVKPVDTSMVGQLTASDAPKIGILTGQGLANLLNAPSLSSGPSSSMKTSSAKSRDPRLRLANSDVASLDRLLPVVNSEPKVEPVGGMISSRKQKTIEEQVMDGPALKRQRNEQTDSSVVKSVQTVSGTGGWLEDRGTAVLGATNRSHALNSSGNDPMRPEYAVTPLSSGSSLANVTVNGNKNLPLTNPGATASLHSLLKDIAVNPSIWMNIIKMEQQKSADPTRSTSQPTCSNSINGSVNAVVSKPRDLGQQAAGTLQVTSQTASVAEPGKVRMKPRDPRRVLHNNTLQKGGSMEFDQSQSKSSTSSNLEMVGNMNFQIQDDQLDRRVVPSNSIVQPDIAQQFTKNLKNIADIVSVSQATSSQPALPQISLSQPSQAYQGRTETIGMLESGKPQSGPGLSSKEVSMGSSRPQNNWDDVEHLFEGFDDQQKAAIHRERARRMQEQRKMFAGRKLCLVLDLDHTLLNSAKFVEVDPMHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKLLDPKGELFAGRVISRGDDGDLLDGDERVPKSKDLEGVMGMESAVVIIDDSLRVWPHNKLNLIVVERYIFFPCSRRQFGLPGPSLLEIDHDERSEDGTLASSLAVIERIHEIFFAHQSLDEADVRNILASEQKKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNSIDEQVTHVVANSLGTDKVNWALSSGRFVVHPGWVEASALLYRRANEKDFAIKP